dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00825
Location and strand information: 44516 - 50050 (+)
Family: GH146|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7684
Protein molecular weight: 204564.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00826
Location and strand information: 50076 - 55331 (+)
Family: GH43_16|CBM22|CBM36|CBM6|GH43_10|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1365
Protein molecular weight: 190882.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00827
Location and strand information: 55780 - 60579 (+)
Family: CBM22|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4294
Protein molecular weight: 176398.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00828
Location and strand information: 61117 - 70938 (+)
Family: GH43_35|GH43|GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6338
Protein molecular weight: 354070.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00829
Location and strand information: 71087 - 72064 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00830
Location and strand information: 72600 - 73247 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit a

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00831
Location and strand information: 73339 - 73563 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit c, sodium ion specific

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00832
Location and strand information: 73583 - 74083 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit b, sodium ion specific

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00833
Location and strand information: 74064 - 74567 (+)
Family: null
Protein type: null
Protein description: ATP synthase subunit delta

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00834
Location and strand information: 74573 - 76078 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit alpha

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00835
Location and strand information: 76083 - 76979 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase gamma chain

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00836
Location and strand information: 76988 - 78394 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase subunit beta

Gene clsuter ID: MGYG000001748_7|CGC2
Gene ID: MGYG000001748_00837
Location and strand information: 78414 - 78830 (+)
Family: 3.A.2.1.5
Protein type: TC
Protein description: ATP synthase epsilon chain

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001748_00825	GH146_e8
MGYG000001748_00826	GH43_e11\|CBM6_e54\|CBM36_e0\|3.2.1.8\|3.2.1.55\|3.2.1.37\|3.2.1.-	xylan
MGYG000001748_00827	GH10_e92\|3.2.1.8	xylan
MGYG000001748_00828	GH43_e170

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001748_00825	hypothetical protein	CAZyme	44516	50050	+	GH146\| CBM22
MGYG000001748_00826	hypothetical protein	CAZyme	50076	55331	+	GH43_16\| CBM22\| CBM36\| CBM6\| GH43_10\| GH43
MGYG000001748_00827	hypothetical protein	CAZyme	55780	60579	+	CBM22\| GH10
MGYG000001748_00828	hypothetical protein	CAZyme	61117	70938	+	GH43_35\| GH43\| GH146
MGYG000001748_00829	hypothetical protein	null	71087	72064	-	No domain
MGYG000001748_00830	ATP synthase subunit a	TC	72600	73247	+	3.A.2.1.5
MGYG000001748_00831	ATP synthase subunit c, sodium ion specific	TC	73339	73563	+	3.A.2.1.5
MGYG000001748_00832	ATP synthase subunit b, sodium ion specific	null	73583	74083	+	ATP-synt_B
MGYG000001748_00833	ATP synthase subunit delta	null	74064	74567	+	OSCP
MGYG000001748_00834	ATP synthase subunit alpha	TC	74573	76078	+	3.A.2.1.5
MGYG000001748_00835	ATP synthase gamma chain	TC	76083	76979	+	3.A.2.1.5
MGYG000001748_00836	ATP synthase subunit beta	TC	76988	78394	+	3.A.2.1.5
MGYG000001748_00837	ATP synthase epsilon chain	TC	78414	78830	+	3.A.2.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature